PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 6DND designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DND_PLP_B_502 | 68% | 7% | 0.162 | 0.973 | 2.89 | 1.97 | 6 | 6 | 4 | 0 | 100% | 0.875 |
| 6DND_PLP_A_502 | 48% | 6% | 0.222 | 0.967 | 2.97 | 2.11 | 3 | 7 | 3 | 0 | 100% | 0.875 |
| 3II0_PLP_D_4 | 87% | 22% | 0.114 | 0.987 | 1.14 | 2.05 | 1 | 6 | 0 | 0 | 100% | 1 |
| 8Z0E_PLP_B_501 | 84% | 33% | 0.091 | 0.951 | 1.24 | 1.42 | 3 | 3 | 0 | 0 | 100% | 1 |
| 6LIG_PLP_B_501 | 44% | 37% | 0.22 | 0.951 | 1.18 | 1.3 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6DNA_PLP_D_502 | 22% | 10% | 0.285 | 0.901 | 2.42 | 1.93 | 3 | 6 | 2 | 0 | 100% | 0.875 |
| 2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
| 3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
| 3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |
